PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.145
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 341aa    MW: 37719.5 Da    PI: 6.5111
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.145genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.46.1e-171562148
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                                  +g+WTteEd++l d++++ G g+W+  +++ g++R++k+c++rw +yl
  evm.model.AsparagusV1_08.145 15 KGPWTTEEDKKLMDYIEESGAGSWRHLPKRAGLNRCGKSCRLRWTNYL 62
                                  79********************************************97 PP
2Myb_DNA-binding55.61.2e-1768112147
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                   rgr+++eE+ l+++++ +lG++ W++Ia+ ++ gRt++++k++w+++
  evm.model.AsparagusV1_08.145  68 RGRFSEEEERLIIHLHSLLGNK-WSAIANQLP-GRTDNEIKNYWNTH 112
                                   89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MGRTPCCEAD ANVKKGPWTT EEDKKLMDYI EESGAGSWRH LPKRAGLNRC GKSCRLRWTN  60
YLRPDIRRGR FSEEEERLII HLHSLLGNKW SAIANQLPGR TDNEIKNYWN THIRKKLLMM  120
GIDPVTHRPR TDLNLLANLP NLIAAAANLQ TNYTANPLMN ALQLPKLQLL QTLIQAVTNP  180
PPPNLGSTGL PRNLNQTSSG VSNLGMQQMP NVNLQALLGS DVNTINRHEF VAPLRYDSCN  240
SSDFGPTTTS NTATTSFMST PTANSAPSLV SASPENYTVD QAPELVNCGD VSSSSPISKP  300
FEQWSGLTLD DLDSDLGWKD ILDQLSWSNP LEQEMDILKN *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.21e-75MYB family protein