PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | evm.model.AsparagusV1_08.1389 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 123aa MW: 14042.8 Da PI: 7.3412 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 28.5 | 3e-09 | 76 | 95 | 2 | 21 |
--SS-EEEEEEE--TT-SS- CS WRKY 2 dDgynWrKYGqKevkgsefp 21 +Dgy+W KYGqK vkg++++ evm.model.AsparagusV1_08.1389 76 SDGYRWHKYGQKFVKGNPNT 95 7****************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 123 aa Download sequence |
MEKNSSNETT EQHLFCSSDC EGDAAIKMDE EHADEPDAKR RLIETQSYMP CSAPVLRTIK 60 EPKIVVQRSC DATRISDGYR WHKYGQKFVK GNPNTSDRRI RWLLKCLEGV FGYPQDISGS 120 KW* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G13960.1 | 6e-20 | WRKY family protein |