PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.1388 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | WRKY | ||||||||
Protein Properties | Length: 137aa MW: 14978.8 Da PI: 9.7181 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 71.3 | 1.3e-22 | 85 | 136 | 2 | 54 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYeg 54 +DgynWrKYGqK+v++s+ +rsYY+Ct +C +kkkv+r+ d++ ++i+Y+g evm.model.AsparagusV1_08.1388 85 SDGYNWRKYGQKQVQSSDRSRSYYKCTNVTCFSKKKVKRCP-DGQETKIIYRG 136 7****************************************.*********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
MTHQALLATV TAQAQMQLQA ARPSSSEALP GPSPEPASIN LAPLQQRPSP VSEDNISTPE 60 PMQPPPSDHK SEAQSTQIVV KTSSSDGYNW RKYGQKQVQS SDRSRSYYKC TNVTCFSKKK 120 VKRCPDGQET KIIYRG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13960.1 | 8e-20 | WRKY family protein |