PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.138 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | G2-like | ||||||||
Protein Properties | Length: 347aa MW: 37825.2 Da PI: 7.8847 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 102.2 | 3.3e-32 | 169 | 222 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ evm.model.AsparagusV1_08.138 169 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 222 9****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 48.7 | 1.7e-15 | 170 | 221 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ evm.model.AsparagusV1_08.138 170 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 221 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence |
MELFPVQPDL SLQISPPNPK PTSNDHPHMD LTDHHHHHHL GFWTKPTKDL GTDIDLSLST 60 SIPTPGYQTH SAHLAHLAHF HHHHRLHDHG AAGYGAANAS PCLNGGSQAE MGFLRPIRGI 120 PVYAAQAHFY DSSNANNMSR LSSPSPSSTS SSRFFPRGIV PVKRSMRAPR MRWTTTLHAR 180 FVHAVELLGG HERATPKSVL ELMDVKDLTL AHVKSHLQMY RTVKNTNAPA ASSGQSDGFE 240 NGSAGEISDD NSVDVQCIMG SQSSIQRLGM NQGANNQYGL WSNSSSRGSW INGKPRDSTI 300 GSKQCFEETQ SKSMEILSDL NSSCLSAEAV SPKRPNLEFT LGIMPH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32240.1 | 2e-53 | G2-like family protein |