PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.1268
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 622aa    MW: 71667.4 Da    PI: 10.1828
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.1268genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.21.5e-182232991691
                                    EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS
                             B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefe 91 
                                    l +p kf +++g+ + +   ltl+d++grsW+v+l++  +k  +r+ +t+GW++F++an+Lk+gD ++F+l ++ +++ 
  evm.model.AsparagusV1_08.1268 223 LNIPAKFRAANGLTEYN--SLTLMDPKGRSWQVQLRHktNKFESRTSMTTGWNKFASANELKQGDKCIFELGSEeNNGI 299
                                    78******9**999766..5***************8876666667*************************987645554 PP
2B356.74.5e-184505281592
                                    -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS
                             B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefe 91 
                                     + +p kf +++g+ + +   ltl+d++grsW+v+l++  +k ++r+ +t+GW++F+ an+Lk+gD ++F+l ++ +++ 
  evm.model.AsparagusV1_08.1268 450 YMNIPAKFRAANGLTEYN--SLTLMDPKGRSWQVQLRHrtNKFQSRTSMTTGWNKFAFANELKQGDKCIFELGSEeNNGI 527
                                    489******9**999766..5***************9965566666*************************987745554 PP

                                    . CS
                             B3  92 l 92 
                                    l
  evm.model.AsparagusV1_08.1268 528 L 528
                                    4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 622 aa     Download sequence    
MYFTGDGWLR FIRAHKLREG YFLVFCYKGN ALFKFRVYDL SACDITSYAS IDAHDDNGNE  60
NVKVNTKSKN ISKQRKMKEK IRVIEVADED EFEEDDGDKE REITEKEEQE KKKVLEVRLK  120
KEKAILKEGY EKENKESIDE KKMVKRRKKI SEVKIEEEHE ELIPKRKRKT SGGKTSESDE  180
PSIKRCMNSG YTEMMNRNNS SPPRGINKFE VSIWPCNLVH PYLNIPAKFR AANGLTEYNS  240
LTLMDPKGRS WQVQLRHKTN KFESRTSMTT GWNKFASANE LKQGDKCIFE LGSEENNGIL  300
LMKVSIKKKE SIDKKKMKEK KKMSGVKFGG EHAILKEGYE KENKESIDEK KMVKRRKKIS  360
EVKIEEEHVQ SCNILACSHV TSFSFFSEEL IPKRKRKTSG GKTSESDEPS IKRCMNLGYT  420
EMMNRNNSSP PRGINKFEVP IWPSNLVQPY MNIPAKFRAA NGLTEYNSLT LMDPKGRSWQ  480
VQLRHRTNKF QSRTSMTTGW NKFAFANELK QGDKCIFELG SEENNGILLM KVSIKKKESI  540
DKKKMKEKNI LLMKVSIKKK ESIDKKKMKE KNKMSGVKFG GEHGDKCVFK LGSKESNGLV  600
QYGRKYLDDL ASFSSSSSGF G*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142148KMVKRRK
2145168KRRKKISEVKIEEEHEELIPKRKR
3146169KRRKKISEVKIEEEHEELIPKRKR
4147170KRRKKISEVKIEEEHEELIPKRKR
5351357KMVKRRK
6542560KKKMKEKNILLMKVSIKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24645.18e-09B3 family protein