PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.1076

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 542aa MW: 59592.2 Da PI: 6.2335

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.1076	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.7	2.1e-32	180	238	1	60
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 ++DgynWrKYGqK+vkgsefprsYY+Ct+++C++kk++ers+ d++++ei+Y+g+H+h+k evm.model.AsparagusV1_08.1076 180 MEDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCQMKKQLERSH-DGQITEIIYKGRHDHPK 238 58**************************************.*************85 PP
2	WRKY	106	2e-33	354	412	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts gC+v+k+ver+++dpk+v++tYeg+Hnh+ evm.model.AsparagusV1_08.1076 354 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSVGCSVRKHVERASHDPKAVITTYEGKHNHD 412 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MSESEEKKDN TIRAEPSPTT GSFSFHSVVN DTVRSNLPYS PKGNYRNCVH DEGISGDFEF 60 KPHVRTSSRS GLSSLGHLTS ITPAQKEQES CRQIQAQTQS QTVESSQLVQ AENLARSSRE 120 LTLPVTASDS PIEMLPSDVN ISEGVTHDDL QQLNGYDNGV QTLQCDNNES SPSTVVEKSM 180 EDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CQMKKQLERS HDGQITEIIY KGRHDHPKPE 240 PNRRLAAGTI LSGQGEERSD RLHSVASAEE KLLNAPHLDP NGNTELSPIS PSEDDAEAGV 300 VGSNQNGDEV ADDDDDPESK RRKMDNATFD ATQIGKNNRE PRVVVQTISE VDILDDGYRW 360 RKYGQKVVKG NPNPRSYYKC TSVGCSVRKH VERASHDPKA VITTYEGKHN HDVPAARNSS 420 HDTASPMVNN GSSPLNTQMP MGISSMLRTT YNSIPTSHCY NRPEETTVNL NLGVGISTNH 480 NTDGNNLMVQ RAPLSVVYGS SGNGLYGSRE GNAEGFSFRA PSVNHSSEHY YPNSGNLVMG 540 P*

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MSESEEKKDN TIRAEPSPTT GSFSFHSVVN DTVRSNLPYS PKGNYRNCVH DEGISGDFEF  60
KPHVRTSSRS GLSSLGHLTS ITPAQKEQES CRQIQAQTQS QTVESSQLVQ AENLARSSRE  120
LTLPVTASDS PIEMLPSDVN ISEGVTHDDL QQLNGYDNGV QTLQCDNNES SPSTVVEKSM  180
EDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CQMKKQLERS HDGQITEIIY KGRHDHPKPE  240
PNRRLAAGTI LSGQGEERSD RLHSVASAEE KLLNAPHLDP NGNTELSPIS PSEDDAEAGV  300
VGSNQNGDEV ADDDDDPESK RRKMDNATFD ATQIGKNNRE PRVVVQTISE VDILDDGYRW  360
RKYGQKVVKG NPNPRSYYKC TSVGCSVRKH VERASHDPKA VITTYEGKHN HDVPAARNSS  420
HDTASPMVNN GSSPLNTQMP MGISSMLRTT YNSIPTSHCY NRPEETTVNL NLGVGISTNH  480
NTDGNNLMVQ RAPLSVVYGS SGNGLYGSRE GNAEGFSFRA PSVNHSSEHY YPNSGNLVMG  540
P*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-119	WRKY family protein