PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.93

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB

Protein Properties

Length: 358aa MW: 39350.3 Da PI: 6.1944

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.93	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.9	3.1e-15	44	89	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd l +v +lG ++W+ Ia+ + gR++k+c++rw + evm.model.AsparagusV1_07.93 44 KGPWSPEEDAVLSTLVSKLGARNWSFIAQGIA-GRSGKSCRLRWCNQ 89 79****************************.*********985 PP
2	Myb_DNA-binding	53.6	5e-17	96	140	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++++eEd +++ a++ +G++ W+ Ia+ ++ gRt++ +k++w++ evm.model.AsparagusV1_07.93 96 RKPFSEEEDRIIIAAHAVHGNK-WAQIAKLLQ-GRTDNAVKNHWNST 140 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MMEEEEEEEE EEQVRESVMI GDDDSANGGG GASTATAGRK EKVKGPWSPE EDAVLSTLVS 60 KLGARNWSFI AQGIAGRSGK SCRLRWCNQL APYVKRKPFS EEEDRIIIAA HAVHGNKWAQ 120 IAKLLQGRTD NAVKNHWNST LRRRAYGYPE RKTTSTLLVN GGVEKIKVSS EKAQSLVPIN 180 PFKSLEVRDT SLSKNLPCQV EEKIDDHVVP CEPKVEDQPK LFRPVARVSA FNIYNTLSGE 240 SKGSLLPRSV HEPQFQASRS TGEACKLLDS LSCEPEVPSR CGHGCCRIEK ESSQTSLLGP 300 EFMEFVEAPP ISSLELALVA SDLSSIAWLK SGLQTTSTRI FSNPRLESWN SGHNVEA*

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MMEEEEEEEE EEQVRESVMI GDDDSANGGG GASTATAGRK EKVKGPWSPE EDAVLSTLVS  60
KLGARNWSFI AQGIAGRSGK SCRLRWCNQL APYVKRKPFS EEEDRIIIAA HAVHGNKWAQ  120
IAKLLQGRTD NAVKNHWNST LRRRAYGYPE RKTTSTLLVN GGVEKIKVSS EKAQSLVPIN  180
PFKSLEVRDT SLSKNLPCQV EEKIDDHVVP CEPKVEDQPK LFRPVARVSA FNIYNTLSGE  240
SKGSLLPRSV HEPQFQASRS TGEACKLLDS LSCEPEVPSR CGHGCCRIEK ESSQTSLLGP  300
EFMEFVEAPP ISSLELALVA SDLSSIAWLK SGLQTTSTRI FSNPRLESWN SGHNVEA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	3e-88	MYB family protein