PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.912
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 157aa    MW: 18583.5 Da    PI: 9.2643
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.912genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.81.1e-2432122193
                                   EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS
                            B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81 
                                   f+k+lt sdv++++rlv+pkkfa+ +g++k     l ++d +g+ W++k++y+ +s+++v+t+GW+ Fvk++++k++D v+
  evm.model.AsparagusV1_07.912  32 FEKELTMSDVGRLSRLVVPKKFAKYFGESK---DLLEFKDIEGNLWRFKYSYWPSSQSFVFTSGWNLFVKEKKVKAKDRVL 109
                                   99*********************5556553...36********************************************** PP

                                   EEE-SS.SEE..E CS
                            B3  82 Fkldgr.sefelv 93 
                                   F+ +++ +++e+ 
  evm.model.AsparagusV1_07.912 110 FYWHEEgDKREFI 122
                                   **76654555554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MIKDGLYERK FAEFLSLVNV RNIEDRKFLL LFEKELTMSD VGRLSRLVVP KKFAKYFGES  60
KDLLEFKDIE GNLWRFKYSY WPSSQSFVFT SGWNLFVKEK KVKAKDRVLF YWHEEGDKRE  120
FIIDVGVNRE AVEEEEMVVV EQSTAKKLKL FGSWIA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.22e-26B3 family protein