PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.828 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | G2-like | ||||||||
Protein Properties | Length: 446aa MW: 49317.7 Da PI: 7.225 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 106.3 | 1.7e-33 | 138 | 192 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLHerF+eav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl evm.model.AsparagusV1_07.828 138 KPRLKWTPELHERFIEAVNQLGGADKATPKTVMRLMGIPGLTLYHLKSHLQKYRL 192 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 68 | 1.6e-21 | 140 | 191 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++e++++av+qlGg t+kt++r mg g+tl+++ks++qky+ evm.model.AsparagusV1_07.828 140 RLKWTPELHERFIEAVNQLGGAdkaTPKTVMRLMGiPGLTLYHLKSHLQKYR 191 89******************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 446 aa Download sequence |
MTPNVSMDSS NLFLSATKNL KCLSSNPLLS RGPNAESIPI ALTYIALDLD QDPLSIMNQP 60 QTSPFQFRNK TMFPRARDPS AEFLRTASES GKMYNHHHHQ GSNNLVSSRT AFPSERHLFL 120 QGGTVQGESG LVLSTDAKPR LKWTPELHER FIEAVNQLGG ADKATPKTVM RLMGIPGLTL 180 YHLKSHLQKY RLGKNLQSQA NTGSPKNAVG CTQVADRIPE DNGLAGNMNM GVQPNKTIHI 240 NEALQMQIEV QRRLHEQLEV QRHLQLRIEA QGKYLQSVLE KAQETLGKQN LGSAGLEAAK 300 VQLSELVSKV SNECFSSAFP GVEEISSLHT LQPHQAQLAD CSIDSCLTSC EGSQKDQEIH 360 NISIGLRAFH GNPPLYTQQT GDDMRLDQSQ SAWCEDLNDQ KMFSSTIVKE PERTIFSVPR 420 DPSILSMNIT PQREKEGSGR XXXXL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04030.3 | 1e-122 | G2-like family protein |