PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.816
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 306aa    MW: 34183 Da    PI: 8.5873
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.816genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.21.6e-174691147
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                  rg W + Ed +l+++v+q+G+ +W++Ia+ +  gR++k+c++rw++ 
  evm.model.AsparagusV1_07.816 46 RGHWRPAEDAKLIELVAQHGPQNWNLIAQSLE-GRSGKSCRLRWFNQ 91
                                  899*****************************.***********996 PP
2Myb_DNA-binding53.26.7e-17100141346
                                   SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
               Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                                   ++T+eE+e+l+ a + +G++ W++Iar ++ gRt++ +k++w+ 
  evm.model.AsparagusV1_07.816 100 PFTQEEEERLLAAQRAFGNK-WALIARLFP-GRTDNAVKNHWHV 141
                                   89******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MGFFLQGESS SGQRYEMGLL MRDEGEGQNG NNEEKMKREY SKFCARGHWR PAEDAKLIEL  60
VAQHGPQNWN LIAQSLEGRS GKSCRLRWFN QLNPRIRKHP FTQEEEERLL AAQRAFGNKW  120
ALIARLFPGR TDNAVKNHWH VIMSKEHRSQ RRRSKHCIKS SVSNPPPLIH CLFPNNAGVI  180
NGINYNEFSG ESSNSNRYES VSTCTDLSLN STSRAGFGLI KSYSSQLQQH GFADKCARST  240
GWYGDALRLV SGVDQSGYSD SHSEASAAES VVSNMSNNGA VNGDREHESE KIGFPFFDFL  300
GVGAM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17800.18e-56MYB family protein