PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | evm.model.AsparagusV1_07.718 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 314aa MW: 34350.1 Da PI: 5.3474 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 85.2 | 6.1e-27 | 148 | 208 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqK++ gs+fprsY+rCt++ gC +kk+v+r +edp + e+tY g+H+++ evm.model.AsparagusV1_07.718 148 DDGYTWRKYGQKDILGSRFPRSYFRCTHKsfyGCDAKKQVQRLDEDPYTYEVTYCGDHTCH 208 8***************************99999**************************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 314 aa Download sequence |
MDRAISQILD ACKLTHELEA SLPHLANQHP SLLKTSCENI VAAFNNAIHE INTQQQQIQA 60 MDFFSPRSIE EHNNPFPLGF DAGCEMPFLG VSGGEAVVDG SSASSAFGRR PGGGSTGQRQ 120 SRKRRENRGM TTVRVPAVRT GNMENPPDDG YTWRKYGQKD ILGSRFPRSY FRCTHKSFYG 180 CDAKKQVQRL DEDPYTYEVT YCGDHTCHTS TTPLVLPSLL TNNDPQPQTS ALMFDAIAQI 240 PQVPPSTSIQ LGSTWFDAGR DEAGAGQVVG PSECPVADLA DVMFNSGSSG SSMDAIFSLR 300 QQHDQSWPKD NEE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G40740.1 | 3e-50 | WRKY family protein |