PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.686

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 574aa MW: 63045.2 Da PI: 9.0565

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.686	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.6	1.2e-33	195	252	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k evm.model.AsparagusV1_07.686 195 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL-DGQITEIVYKGSHNHPK 252 8**************************************.*************85 PP
2	WRKY	105.1	3.6e-33	359	417	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d ++v++tYeg+Hnh+ evm.model.AsparagusV1_07.686 359 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTMGCPVRKHVERASHDLRAVITTYEGKHNHD 417 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MASSTGSLET SANSRPSSFS FSSSFPTSFS ELLNGGGDDD HSCNRGIGVP KFKSITPPSL 60 PISPISPSSY FAIPAGLSPA ELLDSPVLLS SYNILPSPTT GTIPARSYNS KQNPTNYHQD 120 IKEEQRAYSD FSFHTNTKPQ SFMPSSQEAF KDNNHQHQPW SYKENEQMGI LRTSSTELQT 180 SQAPTQTLRE QRKSDDGYNW RKYGQKQVKG SENPRSYYKC TFPNCPTKKK VERSLDGQIT 240 EIVYKGSHNH PKPQSTRRNS SGSQLVQAQA QAQAQAQAQS EVSDHSFGAR SGTPIESVAT 300 PDNSSVSFGD DCGEEVDDDE TDAKRFKKEG ENEGISVTGN RTVREPRVVV QTTSDIDILD 360 DGYRWRKYGQ KVVKGNPNPR SYYKCTTMGC PVRKHVERAS HDLRAVITTY EGKHNHDVPA 420 ARGNCNMHPQ AHTPQLDHNK QAQRGQQQES TQKQEMGLGE EKQRGGSPAA VTKRRGCLSH 480 ASSSNSRDRE PIERRPPPTP DVSLRSSSGM GSEERPANGG DGVKLGAALR RGSGMAVAGE 540 RRIMEQNKHN GERAAQKAES TVEFYKAGDR SSK*

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MASSTGSLET SANSRPSSFS FSSSFPTSFS ELLNGGGDDD HSCNRGIGVP KFKSITPPSL  60
PISPISPSSY FAIPAGLSPA ELLDSPVLLS SYNILPSPTT GTIPARSYNS KQNPTNYHQD  120
IKEEQRAYSD FSFHTNTKPQ SFMPSSQEAF KDNNHQHQPW SYKENEQMGI LRTSSTELQT  180
SQAPTQTLRE QRKSDDGYNW RKYGQKQVKG SENPRSYYKC TFPNCPTKKK VERSLDGQIT  240
EIVYKGSHNH PKPQSTRRNS SGSQLVQAQA QAQAQAQAQS EVSDHSFGAR SGTPIESVAT  300
PDNSSVSFGD DCGEEVDDDE TDAKRFKKEG ENEGISVTGN RTVREPRVVV QTTSDIDILD  360
DGYRWRKYGQ KVVKGNPNPR SYYKCTTMGC PVRKHVERAS HDLRAVITTY EGKHNHDVPA  420
ARGNCNMHPQ AHTPQLDHNK QAQRGQQQES TQKQEMGLGE EKQRGGSPAA VTKRRGCLSH  480
ASSSNSRDRE PIERRPPPTP DVSLRSSSGM GSEERPANGG DGVKLGAALR RGSGMAVAGE  540
RRIMEQNKHN GERAAQKAES TVEFYKAGDR SSK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-103	WRKY family protein