PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.671

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 328aa MW: 35686.7 Da PI: 5.0542

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.671	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	80.2	2.1e-25	154	214	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++++s+fprsY+rCt++ gC++ k+v+ s++dp+ + +tY geH ++ evm.model.AsparagusV1_07.671 154 TDDYSWRKYGQKVIHSSKFPRSYFRCTHKydqGCQAIKQVQVSENDPSNFLMTYIGEHSCN 214 79************************99999***********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MTSPILSPFP HRYPFIYDPS QCSSLIPLAS SPQSTTTMKT LPSISTAAVE ELTKGREIAA 60 KLSVVLRKEE SSGDSTSAAG GLIEEIISSF SRALDVLGSA ESAGDDGIPA MASGDVVGSE 120 SCGKKRRSGA VGRGGFRKRK QASQWRTVLS KTCTDDYSWR KYGQKVIHSS KFPRSYFRCT 180 HKYDQGCQAI KQVQVSENDP SNFLMTYIGE HSCNNPNIIP TIIQHNNSIE PSMISFGSNI 240 SDITQENPLP PSPLFSKTQE NDEEVEVISK NLTPATASSE YFDLPDFGDI SGLNSSTGNL 300 DMSFIADSFN FEDDMFSFHQ FGDVHLS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	140	KKRRSGAVGRGGFRKRK
2	125	141	KKRRSGAVGRGGFRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	3e-31	WRKY family protein