PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.531

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

Protein Properties

Length: 878aa MW: 96259.6 Da PI: 7.0067

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.531	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.8	2e-18	310	409	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkeg 77 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++g evm.model.AsparagusV1_07.531 310 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLKIQDAKGKEWHFQFRFwpNNNSRMYVLE-GVTPCIQSLQLQAG 389 99************************555566778***********99899999999.*********** PP -EEEEEE-SSSEE..EEEEE- CS B3 78 DfvvFkldgrsefelvvkvfr 98 D+v+F++++ e++l +++++ evm.model.AsparagusV1_07.531 390 DTVTFSRMD-PEGKLIMGFRK 409 ****876.77777777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 878 aa Download sequence
MTSKRCMNGG CGATLSAEDW RRGWALRSGG FATLCDKCGM AYEQSVFCDL FHQKESGWRE 60 CLLCGKRLHC GCIASKSLFE LLDGGGVQCI SCMKNSGLSG LSFIPSETIQ EFLPQSSQRV 120 LSLAGRSLKD EKANEDSNVR VDEDVISKGK AIQLGKNMEV NGQNNMLLGR RESLSGSFGH 180 IKREQMAFHA GKACLNISLG NSNQRTTMEP ALSTGIRPSS GVEDGRDQSR SLSALQQAQR 240 ARHLLPKPSK TGQTFSSEAS KEMLSNMRVA RPPAEGRGRN QLLPRYWPRI TDQELQQISG 300 DSNSTIVPLF EKVLSASDAG RIGRLVLPKA CAEAYFPPIS QPEGLPLKIQ DAKGKEWHFQ 360 FRFWPNNNSR MYVLEGVTPC IQSLQLQAGD TVTFSRMDPE GKLIMGFRKA TNSVPLQDSQ 420 ISAIANAGLG NETFFSGVTE NLSIVSGYSG LLQSLKGTAA PRLSYFSEHL NLADSDVSWQ 480 KTDTHGGRSN DGFLLQPSLA QEKKRSRNIG GKSKRLHMDN DDALELKLSW EEAQDLLRPP 540 PSAKPSVVMI EDQEFEEYEE PPVFGKRTIF TAQLSGEQDQ WIQCDDCFKW RRLPVDVLVP 600 SNWTCADNTC DPRRSSCSVP DELSPTEIHN LLRQDAEIKM MRTPSISKQN TPDFEASGLD 660 ALATAASIGD TTNQATVSAS ATTTKHPRHR PGCTCIVCIQ PPSGKGPKHH PNCTCNVCLT 720 VKRRFKTLML RKKKRQSERE EAEANKRLML PWGAKEEIEG SSIQKENELG IDAGKATVVG 780 DIDTGKGKID LNCQPEGLQS SSRVSMMSLL HVASLPLENY LKQNGLTSLT CEQQVSSSSV 840 TVPQAMPVDE SEERTPDEEG SGDEGHICSE TAKSDAS*

Sequence ? help Back to Top

Protein Sequence Length: 878 aa Download sequence

MTSKRCMNGG CGATLSAEDW RRGWALRSGG FATLCDKCGM AYEQSVFCDL FHQKESGWRE  60
CLLCGKRLHC GCIASKSLFE LLDGGGVQCI SCMKNSGLSG LSFIPSETIQ EFLPQSSQRV  120
LSLAGRSLKD EKANEDSNVR VDEDVISKGK AIQLGKNMEV NGQNNMLLGR RESLSGSFGH  180
IKREQMAFHA GKACLNISLG NSNQRTTMEP ALSTGIRPSS GVEDGRDQSR SLSALQQAQR  240
ARHLLPKPSK TGQTFSSEAS KEMLSNMRVA RPPAEGRGRN QLLPRYWPRI TDQELQQISG  300
DSNSTIVPLF EKVLSASDAG RIGRLVLPKA CAEAYFPPIS QPEGLPLKIQ DAKGKEWHFQ  360
FRFWPNNNSR MYVLEGVTPC IQSLQLQAGD TVTFSRMDPE GKLIMGFRKA TNSVPLQDSQ  420
ISAIANAGLG NETFFSGVTE NLSIVSGYSG LLQSLKGTAA PRLSYFSEHL NLADSDVSWQ  480
KTDTHGGRSN DGFLLQPSLA QEKKRSRNIG GKSKRLHMDN DDALELKLSW EEAQDLLRPP  540
PSAKPSVVMI EDQEFEEYEE PPVFGKRTIF TAQLSGEQDQ WIQCDDCFKW RRLPVDVLVP  600
SNWTCADNTC DPRRSSCSVP DELSPTEIHN LLRQDAEIKM MRTPSISKQN TPDFEASGLD  660
ALATAASIGD TTNQATVSAS ATTTKHPRHR PGCTCIVCIQ PPSGKGPKHH PNCTCNVCLT  720
VKRRFKTLML RKKKRQSERE EAEANKRLML PWGAKEEIEG SSIQKENELG IDAGKATVVG  780
DIDTGKGKID LNCQPEGLQS SSRVSMMSLL HVASLPLENY LKQNGLTSLT CEQQVSSSSV  840
TVPQAMPVDE SEERTPDEEG SGDEGHICSE TAKSDAS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	722	733	KRRFKTLMLRKK
2	722	735	KRRFKTLMLRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein