PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | evm.model.AsparagusV1_07.3911 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 147aa MW: 16102.2 Da PI: 4.7618 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.5 | 1e-07 | 58 | 100 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r ++ e+ErrRR+++N+++++Lr+l+ k ++L A++YI++Lq evm.model.AsparagusV1_07.3911 58 RSKNLEAERRRRSKLNNRLFTLRSLMSKE-----------STLVDAIDYIQKLQ 100 778889*******************9887...........8************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 147 aa Download sequence |
MPRYPRDCGA DFDAMDFVDS TAAMATVVEE EEAGGGGGGG EGFGDPAIVA DTGEARYRSK 60 NLEAERRRRS KLNNRLFTLR SLMSKESTLV DAIDYIQKLQ KRICDLKLEL SKLTDEDQEK 120 KGSASSTESI APPEIKLCPV QLLYHL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G26744.1 | 9e-12 | bHLH family protein |