PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.3901 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 230aa MW: 25318.8 Da PI: 6.0564 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.4 | 9.3e-12 | 75 | 118 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 rE+ RRdr+N++f eL ++l + ++K++Ka+iL Av+ + +L evm.model.AsparagusV1_07.3901 75 SREKMRRDRLNDKFMELGSILEPG----NPKMDKAAILSDAVRMVTQL 118 69******************9986....8**************99988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MASPENSNWV LDYPLIDSIS VTGGDFGVPG NGFFWTPQGI NCTPSASMET SGNSVDSAVL 60 KEPGSKKRVK SVPSSREKMR RDRLNDKFME LGSILEPGNP KMDKAAILSD AVRMVTQLRS 120 EAQKLKDSNE SLQEKIKDLK SEKNELRDEK LRLKQEKENL EQQIKLLNSR PSFMPQPSVI 180 PTAFAAQSQG GGHKMMMPVI GYPGYPMWQF MPPADVDTSQ DAESCPPVA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 5e-82 | bHLH family protein |