PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3861
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 355aa    MW: 39841.9 Da    PI: 9.3387
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3861genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.47e-1086133455
                                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    +h+ +Er RR++i +++  L+ l+P +    +k   Ka++L + ++YI+ Lq
  evm.model.AsparagusV1_07.3861  86 SHSLAERARREKISERMKFLQALVPGC----NKVIGKASVLDEIINYIQALQ 133
                                    8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MVCTTTKLVS FRTVTVEELA TRLQTDSEAK RLKKMKSRDE NSESKIDAEA SSGLCNKPAD  60
SNTHPSEAPK QDYIHVRARR GQATDSHSLA ERARREKISE RMKFLQALVP GCNKVIGKAS  120
VLDEIINYIQ ALQRQVEFLS MKLEAVNSRM NPGIEGFPPK EFVAQAYNTP SLAFTGSQAP  180
REYDQGSASE WLHMQVGAYC VVAVEEAGRQ LPIAFLERVK EDFTKRYGGG KAATAVANSL  240
NREFGPKLKE HMQYCVDHPE EISKLAKVKA QVTEVKGVMM ENIEKVLDRG EKIELLVDKT  300
ENLRSQAQDF RQQGTQMRRK MWFQNMKVKL IVLGIIVALI LIIILSVCHG FKCH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.11e-73bHLH family protein