PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.3815 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 353aa MW: 38565.4 Da PI: 7.2942 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34 | 6.6e-11 | 302 | 347 | 4 | 46 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 WT+eE+ l ++vk++G g W++I + + + R+ ++k++w++ evm.model.AsparagusV1_07.3815 302 WTEEEEHTLRKGVKKYGVGKWALIKESYPdilEERSSGDLKDKWRN 347 ********************************99***********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence |
MNFPPTAGTA EVRNGGNGVF TEGCCLSSGA NQQRQSMSVI QENTLEPGNE NNHNMAEVPH 60 SDIVTEAAGL PSIETGHQLS DGGGCSLSGF GEDHPREEPN STEPCPCSNV LPAAAEVQTI 120 ETANGSNLQR VETCENVVDR EQSPSLDNGG EVAPTRDVNS GGSEHNINHD TVMEPAIADQ 180 HPRESKHNKE NQNVSAKLRA SLSDKGKRAI NAEDTNNLAV NTERKGKTGK KRVSHAVGAP 240 SIMDRNPTAR TYEWDDSMDT TPGKSPNPVA RRQSPRVKRK SSPGTNVPWT RNFSGRRKKK 300 WWTEEEEHTL RKGVKKYGVG KWALIKESYP DILEERSSGD LKDKWRNITR KK* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 278 | 300 | KRKSSPGTNVPWTRNFSGRRKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06910.1 | 4e-11 | MYB_related family protein |