PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3815
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 353aa    MW: 38565.4 Da    PI: 7.2942
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3815genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding346.6e-11302347446
                                    S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS
                Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 
                                    WT+eE+  l ++vk++G g W++I +  +   + R+  ++k++w++
  evm.model.AsparagusV1_07.3815 302 WTEEEEHTLRKGVKKYGVGKWALIKESYPdilEERSSGDLKDKWRN 347
                                    ********************************99***********9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MNFPPTAGTA EVRNGGNGVF TEGCCLSSGA NQQRQSMSVI QENTLEPGNE NNHNMAEVPH  60
SDIVTEAAGL PSIETGHQLS DGGGCSLSGF GEDHPREEPN STEPCPCSNV LPAAAEVQTI  120
ETANGSNLQR VETCENVVDR EQSPSLDNGG EVAPTRDVNS GGSEHNINHD TVMEPAIADQ  180
HPRESKHNKE NQNVSAKLRA SLSDKGKRAI NAEDTNNLAV NTERKGKTGK KRVSHAVGAP  240
SIMDRNPTAR TYEWDDSMDT TPGKSPNPVA RRQSPRVKRK SSPGTNVPWT RNFSGRRKKK  300
WWTEEEEHTL RKGVKKYGVG KWALIKESYP DILEERSSGD LKDKWRNITR KK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1278300KRKSSPGTNVPWTRNFSGRRKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06910.14e-11MYB_related family protein