PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.3783 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 126aa MW: 13884.5 Da PI: 9.235 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.4 | 4.3e-10 | 78 | 118 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++++E+ l ++ k+ G + W++Ia +++ gRt++++ +w evm.model.AsparagusV1_07.3783 78 EFSEDEEILVAKMYKLIGQR-WSLIAGRIP-GRTAEEIEKYWT 118 79****************99.*********.***********6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence |
MAGLGLGAGR WPSAADERSL GFSSRHLRIF RARGSWETAA AGARWRRTSG CTDGLGPTAT 60 TRGRCAGEEK NEESKVLEFS EDEEILVAKM YKLIGQRWSL IAGRIPGRTA EEIEKYWTTR 120 YSNSE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46410.1 | 3e-18 | MYB_related family protein |