PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.375 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 293aa MW: 32363.8 Da PI: 6.3639 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.4 | 2.1e-15 | 20 | 64 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rW++eE+e+++d+ ++G + Wk+I +g ++t q++s+ qky evm.model.AsparagusV1_07.375 20 RERWSEEEHERFLDGLLLFGRE-WKKIEDFVG-TKTVIQIRSHAQKY 64 78******************99.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MDADGSSKKL RKPYTITKSR ERWSEEEHER FLDGLLLFGR EWKKIEDFVG TKTVIQIRSH 60 AQKYFLKVQK NGLMAHVPPP LPRRNHAYSQ KSSEDAMLPI QASVAFPSPS GCYMPPCASW 120 DEKAMLMGYA SSSDSMSSNY PAILSGVEGD NGSGIADIYN QKFFWSGSSS RSNLMHEAPE 180 QGSQQSLNPV VPNFAEVYNL IATMFDPEIT DPFPIYMKKL NEMDPITAKT ALVLAKNLTI 240 NLSSPDFEPL GRWLVTCDAN NKATGETSVA AAAVANQIYS MPSQYAGFLP MP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G09600.1 | 1e-75 | MYB_related family protein |