PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.375
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 293aa    MW: 32363.8 Da    PI: 6.3639
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.375genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.42.1e-152064147
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                  r rW++eE+e+++d+  ++G + Wk+I   +g ++t  q++s+ qky
  evm.model.AsparagusV1_07.375 20 RERWSEEEHERFLDGLLLFGRE-WKKIEDFVG-TKTVIQIRSHAQKY 64
                                  78******************99.*********.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MDADGSSKKL RKPYTITKSR ERWSEEEHER FLDGLLLFGR EWKKIEDFVG TKTVIQIRSH  60
AQKYFLKVQK NGLMAHVPPP LPRRNHAYSQ KSSEDAMLPI QASVAFPSPS GCYMPPCASW  120
DEKAMLMGYA SSSDSMSSNY PAILSGVEGD NGSGIADIYN QKFFWSGSSS RSNLMHEAPE  180
QGSQQSLNPV VPNFAEVYNL IATMFDPEIT DPFPIYMKKL NEMDPITAKT ALVLAKNLTI  240
NLSSPDFEPL GRWLVTCDAN NKATGETSVA AAAVANQIYS MPSQYAGFLP MP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-75MYB_related family protein