PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3695
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family TCP
Protein Properties Length: 307aa    MW: 34421.5 Da    PI: 10.1154
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3695genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP117.51.6e-36682162130
                            TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssss 81 
                                    a++kdrhski T++g+RdRR+Rl +e+a +fF +qd+LG+dk+skt++WL+++ak +i++l   + ++ ++++ ++ss+s
  evm.model.AsparagusV1_07.3695  68 ATRKDRHSKIVTAQGPRDRRMRLNLEVAPQFFHVQDMLGYDKASKTVQWLMEEAKDSIDKLKAATRPKGRSSSGGASSKS 147
                                    78*************************************************************95555544433333333 PP

                            TCP  82 asnsssg....................kaaksaa.kskksqksaasalnlakesrakarararertrekm 130
                                    +++s+ +                    + +k+ +  +++s+++a ++ +la+e r  arararertr k+
  evm.model.AsparagusV1_07.3695 148 TEASTLElefedtstisdysgkhlaseH-KKARPkAKRESSRRAPCQPELARELRDMARARARERTRTKK 216
                                    3322222445555566677777888853.333333566666666678*******************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MESRPFSALL DFPFSPFALN QGNTLHDLVF PQLGDESNQY SLSKPPTAPP PPSNKVKSMS  60
TANSRKRATR KDRHSKIVTA QGPRDRRMRL NLEVAPQFFH VQDMLGYDKA SKTVQWLMEE  120
AKDSIDKLKA ATRPKGRSSS GGASSKSTEA STLELEFEDT STISDYSGKH LASEHKKARP  180
KAKRESSRRA PCQPELAREL RDMARARARE RTRTKKLGVR DNKWNDLLSI NEQESGHDLK  240
SSLHFVAGVV EQCSTSKHHA AQFNNNAGRE NELSVSIVDY NSMTFPAELW ANQIESIEDG  300
IQNRLW*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.18e-24TCP family protein