PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.3516 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 87aa MW: 9799.06 Da PI: 9.3313 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.5 | 2.8e-09 | 13 | 53 | 15 | 55 |
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +iN+ +++L+++lP+a + +s++ s + L++++ YIksL+ evm.model.AsparagusV1_07.3516 13 EINELISKLQSVLPEARRRNSGRASASKLLKETCSYIKSLR 53 7**************88**********************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 87 aa Download sequence |
MSSRRGARIS DEEINELISK LQSVLPEARR RNSGRASASK LLKETCSYIK SLRREVDDLS 60 DRLSELMNTM DSNSEQAEII RSLLRS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26945.1 | 7e-23 | bHLH family protein |