PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.3513 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 348aa MW: 39734 Da PI: 5.62 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.3 | 5.4e-18 | 144 | 197 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rqV +WFqNrRa++k evm.model.AsparagusV1_07.3513 144 KKRRLNIEQVRTLEKNFEIGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197 4557899**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 130.7 | 5.7e-42 | 143 | 233 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerL 80 ekkrrl+ eqv++LE++Fe +kLeperK++lar+Lglqprqva+WFqnrRAR+ktkqlEkdy++Lkr++da++++ne+L evm.model.AsparagusV1_07.3513 143 EKKRRLNIEQVRTLEKNFEIGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQFDAIRSDNESL 222 69****************************************************************************** PP HD-ZIP_I/II 81 ekeveeLreel 91 ++++++L++e+ evm.model.AsparagusV1_07.3513 223 QAQNKKLQAEI 233 ********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MMHFFLIFLI SFFYIPCYMS FFSPCTLISL SLSLSLSLSF PFQHILAFYD PMLNLDQMGC 60 NGMASSSPFF PPNFLLQIQT PHEVEDHHQP TNHLSSLLPT NPQDFRGVGA MLGKRSMSFS 120 GIEPCEDIGG EDELSDDCSQ AGEKKRRLNI EQVRTLEKNF EIGNKLEPER KMQLARALGL 180 QPRQVAIWFQ NRRARWKTKQ LEKDYDVLKR QFDAIRSDNE SLQAQNKKLQ AEILALKGRE 240 TSELINLNKE TEGSCSNRSE NSSEVNLDIS RTPAIESPLN PNQSIPFFQS IRPPTTMVQL 300 LQGQNRQELP CPKIEHNGVN DENFSNLLCG MDDQSAFWPW SDHQNFH* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 192 | 200 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 1e-95 | HD-ZIP family protein |