PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3513
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HD-ZIP
Protein Properties Length: 348aa    MW: 39734 Da    PI: 5.62
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3513genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.35.4e-18144197356
                                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                       Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                                    k+++++ eq+++Le+ Fe  +++  e++ +LA+ lgL+ rqV +WFqNrRa++k
  evm.model.AsparagusV1_07.3513 144 KKRRLNIEQVRTLEKNFEIGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 197
                                    4557899**********************************************9 PP

2HD-ZIP_I/II130.75.7e-42143233191
                    HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerL 80 
                                    ekkrrl+ eqv++LE++Fe  +kLeperK++lar+Lglqprqva+WFqnrRAR+ktkqlEkdy++Lkr++da++++ne+L
  evm.model.AsparagusV1_07.3513 143 EKKRRLNIEQVRTLEKNFEIGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQFDAIRSDNESL 222
                                    69****************************************************************************** PP

                    HD-ZIP_I/II  81 ekeveeLreel 91 
                                    ++++++L++e+
  evm.model.AsparagusV1_07.3513 223 QAQNKKLQAEI 233
                                    ********987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MMHFFLIFLI SFFYIPCYMS FFSPCTLISL SLSLSLSLSF PFQHILAFYD PMLNLDQMGC  60
NGMASSSPFF PPNFLLQIQT PHEVEDHHQP TNHLSSLLPT NPQDFRGVGA MLGKRSMSFS  120
GIEPCEDIGG EDELSDDCSQ AGEKKRRLNI EQVRTLEKNF EIGNKLEPER KMQLARALGL  180
QPRQVAIWFQ NRRARWKTKQ LEKDYDVLKR QFDAIRSDNE SLQAQNKKLQ AEILALKGRE  240
TSELINLNKE TEGSCSNRSE NSSEVNLDIS RTPAIESPLN PNQSIPFFQS IRPPTTMVQL  300
LQGQNRQELP CPKIEHNGVN DENFSNLLCG MDDQSAFWPW SDHQNFH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192200RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.11e-95HD-ZIP family protein