PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.3511

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB

Protein Properties

Length: 460aa MW: 51251.2 Da PI: 5.2951

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.3511	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.3	2.7e-11	22	61	8	48
HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 Edell v +G+++W++Ia ++ +t qc+ rw +yl evm.model.AsparagusV1_07.3511 22 EDELLRAQVSAHGTENWTSIATRFK-DKTSRQCRRRWCTYL 61 9*********************9.**********997 PP
2	Myb_DNA-binding	43.2	8.8e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd +l +a k +G++ W+ Ia+ + gRt++ +k+r+ + evm.model.AsparagusV1_07.3511 67 KGGWSPEEDMILCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 110 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MTADFSFTRT RGGPYFPPKD AEDELLRAQV SAHGTENWTS IATRFKDKTS RQCRRRWCTY 60 LNSEGKKGGW SPEEDMILCE AQKIFGNRWT EIAKVVSGRT DNAVKNRFST LCKKRAKTDV 120 SAKDYDNSWL NPNDKRVITE NESFRAEGAE SLAPTKRLRF QILDSRENLN PNKRLAKQPV 180 MEEVQLRSPL SVLHQNINNI GGLPTQHPDN NSKLAIHNAS TGTSNETKGS FLKRDDPKLI 240 ALLQQAELLS SLAQKVNSEN SSQSFENAWK ELQDYLIKTG CSGISPTTPD MGFLLEDFDS 300 LIEYLKSEST EEKLSWREPC FLDSQDSSEC STESVQIFQV PTIDNCQTDD TISKQNANFI 360 CTKADELDPK VYNSRVGALA PSEELKEVAG SICNRTDAEF DSPHQTIPSF KSLTEGVPTP 420 EFSASEKRFL LSVLGVSSPA PDPSSAQPPS CKRILLDSL*

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MTADFSFTRT RGGPYFPPKD AEDELLRAQV SAHGTENWTS IATRFKDKTS RQCRRRWCTY  60
LNSEGKKGGW SPEEDMILCE AQKIFGNRWT EIAKVVSGRT DNAVKNRFST LCKKRAKTDV  120
SAKDYDNSWL NPNDKRVITE NESFRAEGAE SLAPTKRLRF QILDSRENLN PNKRLAKQPV  180
MEEVQLRSPL SVLHQNINNI GGLPTQHPDN NSKLAIHNAS TGTSNETKGS FLKRDDPKLI  240
ALLQQAELLS SLAQKVNSEN SSQSFENAWK ELQDYLIKTG CSGISPTTPD MGFLLEDFDS  300
LIEYLKSEST EEKLSWREPC FLDSQDSSEC STESVQIFQV PTIDNCQTDD TISKQNANFI  360
CTKADELDPK VYNSRVGALA PSEELKEVAG SICNRTDAEF DSPHQTIPSF KSLTEGVPTP  420
EFSASEKRFL LSVLGVSSPA PDPSSAQPPS CKRILLDSL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	6e-97	MYB family protein