PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3460
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HD-ZIP
Protein Properties Length: 850aa    MW: 92953 Da    PI: 6.4281
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3460genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.93.5e-182481457
                                   -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                       Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                                     ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  evm.model.AsparagusV1_07.3460 24 YVRYTPEQVEALERVYSECPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 81
                                   6789****************************************************97 PP
2bZIP_1201.5e-06751171860
                                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                         bZIP_1  18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                                    rr+R++ ++e  +L++   +L+a Nk L +e+++l+k+v++l 
  evm.model.AsparagusV1_07.3460  75 RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLV 117
                                    9***************************************985 PP
3START173.91e-541703772204
                                    HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEE CS
                          START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaet 81 
                                    +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W +++++ ++
  evm.model.AsparagusV1_07.3460 170 IAEETLAEFLSKATGTAVEWVQMVGMKPGPDSIGIIAVSHNCSGVAARACGLVSLEPT-KVAEILKDRPSWYRDCRSLDV 248
                                    68999*****************************************************.8888888888*********** PP

                                    EEEECTT..EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEE CS
                          START  82 levissg..galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgilie 155
                                    l vi +g  g ++lm+++++a+++l++ Rdf+++Ry+  l++g++vi+++S+++ +  p     s++vRae+lpSg+li+
  evm.model.AsparagusV1_07.3460 249 LTVIPTGngGNIELMYMQTYAPTTLASaRDFWTLRYTTGLEDGSLVICERSLTPSTGGPAgppASGFVRAEMLPSGYLIR 328
                                    ******************************************************999998888***************** PP

                                    EECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXX CS
                          START 156 pksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqc 204
                                    p+++g+s +++v+h+dl++++++++lr+l++s  + ++k++ a+l++ +
  evm.model.AsparagusV1_07.3460 329 PCEGGGSMIHIVDHMDLDAWSVPEVLRPLYESPKILAQKMTIAALHHIR 377
                                    *********************************************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 850 aa     Download sequence    
MAMVVAGQGQ NGKSIQQQID AGKYVRYTPE QVEALERVYS ECPKPSSIRR QQLIRECPIL  60
SNIEPKQIKV WFQNRRCREK QRKEASRLQT VNRKLTAMNK LLMEENDRLQ KQVSQLVYDN  120
GYMRQQIHTV ATTDTSCESV VTSGQHHQQQ NPTPQHPQRD ANNPAGLLAI AEETLAEFLS  180
KATGTAVEWV QMVGMKPGPD SIGIIAVSHN CSGVAARACG LVSLEPTKVA EILKDRPSWY  240
RDCRSLDVLT VIPTGNGGNI ELMYMQTYAP TTLASARDFW TLRYTTGLED GSLVICERSL  300
TPSTGGPAGP PASGFVRAEM LPSGYLIRPC EGGGSMIHIV DHMDLDAWSV PEVLRPLYES  360
PKILAQKMTI AALHHIRQIA QETSGEIAYG GGRQPAVLRT FSQRLSKGFN DAVNGFTDDG  420
WSLLGSDGVE DVTIMINSSP NKLFGSHANS SIFSPIGGGI LCAKASMLLQ NVPPALLVRF  480
LREHRSEWAD CGVDAYSAAS LRASPYAVPG LRASNGFMGG QVILPLAHTV EHEEFLEVIR  540
LEGHGFTQDD VIMSRDMFLL QLCSGVDENS VGACAQLVFA PIDESFADDA PLLPSGFRII  600
PLDPKTDSPA ATRTLDLAST LEVGPGSAAR SASDNASNAY NLRSVLTIAF QFTFENHLRD  660
NVAAMARQYV RSVVASVQRV AMAIAPSRLG TQLGVKHPPG SPEAQTLARW ISRSYRFHTG  720
VELFRAEPQA DDSLLKLLWQ HSDAIMCCSL KATPVFTFAN QAGLDMLETT LIALQDITLE  780
KILDDGGRKI LCLEFPKIMQ QGFAYLPGGI CVSSMGRPVS YEQAVAWKVL NDDDSHHCLA  840
FMFVNWSFV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein