PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3455
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 292aa    MW: 32163.5 Da    PI: 7.0816
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3455genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.78.4e-11555146
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
                Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                                   +++WT+eE+  l+ +++++G+g W tI +          R+  ++k++w++
  evm.model.AsparagusV1_07.3455  5 KQKWTAEEESALKAGIAKHGTGKWCTILKDTEfshilYSRSNVDLKDKWRN 55
                                   79***********************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MGAPKQKWTA EEESALKAGI AKHGTGKWCT ILKDTEFSHI LYSRSNVDLK DKWRNISIPS  60
GRGPQRAPMA VKGSTRQILK NTNRQMALEN VDDYPDETID VKPLAVSAGS PQINTPKKSE  120
AKLETLILEA IINLKEPTGS NKTTITMYIE NQYVPPPDFK QAMSGELQRL TETGKLIKAK  180
HNYKVALRSD FPGGRSSKVL HEGRQREPSR EDKAGIKHIK KFPIDTNLEW MELMTAQEAA  240
AAASQAIAKA EIATAEAEEA VRRAESAEAD YEESQAFADA VALAFPTEME L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-56MYB_related family protein