PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3433
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family TCP
Protein Properties Length: 449aa    MW: 49019.4 Da    PI: 7.5881
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3433genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP132.63.6e-41682112132
                            TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssss 81 
                                     g+kdrhsk++T++g+RdRRvRls+++a++f+dLqd+LG+d++sk+ieWL+++a+ ai el++++++ +    + + +++
  evm.model.AsparagusV1_07.3433  68 SGGKDRHSKVYTAKGLRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAIEWLIKAAESAIAELPSLDTTFPDP--PLELQQQ 145
                                    689*************************************************************4443322..2333333 PP

                            TCP  82 asnsssg..............kaaksaa.kskksqksaasalnlak.esrakarararertrekmri 132
                                    +++  ++                + +++ +s+ s++s+ s+l+l++ esr kar+rarer +ek r 
  evm.model.AsparagusV1_07.3433 146 QKQLAIEkvmpsdsgidpeadP-SYNHQqHSSASETSKGSVLSLSRsESRVKARERARERVKEKDRD 211
                                    3333333455566677788743.444444888888999999**********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    
MEIEENHRNH KRSRVGNGNQ AAAKLDEDED DGDQNKELSI SNNNSSSSNR MRPWHHPSSR  60
IFRVSRASGG KDRHSKVYTA KGLRDRRVRL SVSTAIQFYD LQDRLGYDQP SKAIEWLIKA  120
AESAIAELPS LDTTFPDPPL ELQQQQKQLA IEKVMPSDSG IDPEADPSYN HQQHSSASET  180
SKGSVLSLSR SESRVKARER ARERVKEKDR DEAQVVSHHQ TLDPSLNSQG SFTKLLTGGS  240
SSSTAVTASS TADFIHNQLH NLPPVTSTTD YFGIQSSLLG QQQQRQQKST HLISSAGFSS  300
QAHFGNSSPI GMVPLFTNAG DHPTTETQQF AFDHFFPVAT ATASTGGGGG DYSLNFSISP  360
SLAGFHRGTL QSNSTPHHHH HHHQLQLSHH HQVQAQRFSS ALDGSSVPFF FGAPATTTTA  420
GSHTENPYSS ASGFDGYKHL QLNGKGKN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.13e-43TCP family protein