PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.3250

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

CPP

Protein Properties

Length: 813aa MW: 88802.3 Da PI: 6.7401

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.3250	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.9	6.4e-16	525	563	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag +C e C C +C Nk evm.model.AsparagusV1_07.3250 525 ACKRCNCKKSKCLKLYCECFAAGIYCVEPCACIGCLNKP 563 589**********************************96 PP
2	TCR	53	6.8e-17	610	649	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks+ClkkYCeCf+ g+ Cs +C+Ce+C+N+ evm.model.AsparagusV1_07.3250 610 RHKRGCNCKKSNCLKKYCECFQGGVGCSPSCRCEGCRNTF 649 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 813 aa Download sequence
MRENPTVNPT LIAASNLING EKRKAVKLPP PGLSFLGGGD RIRLPRAKTQ REDSPTFNFI 60 DDLSPIQPVK SAHGVQVFHS LSFASISSVF TSPQVSSQKE SRFRYPCSGS SKLGSSAENL 120 DQNNLYTGTS DYINLAVARE KCNTICSLNE ANVDPPEQCT TRPNDVPQAA IQYDRDSPKH 180 NTVAGCGVKT EVKLDNGEAL VELAHVAHDG VEKRKVLFAT EIELRDEHQS TQDEEEVAAC 240 DWENLISVDT NDLLVFDSST DSEACKDQEE DFGDDDATLM SSLKPVDSVD PYFRNAVQYP 300 QEGNDEHAIE EHGTDHTPQI LSGTFQNQVL LSDEDHETEK ETGNCISADC KVESQQQRGM 360 RRRCLTFELA GGSKKNSTIN SNLHPSVLLP SSRKCTADNK NLISLKPGSS SLSRALPSIG 420 LHLNTLRTIP TDRMVTKGTP ALGKRFISMS CSINPYPPVT VEQSAVEKSL DVVMDKHPTG 480 KEVLNHDVSH DDASKAPEFD DSNNLTQRSP KKRKCKSESD GDGDACKRCN CKKSKCLKLY 540 CECFAAGIYC VEPCACIGCL NKPIHEETVL ATRKQIESRN PLAFAPKVIR ASKPVQDMGE 600 ETNKTPASAR HKRGCNCKKS NCLKKYCECF QGGVGCSPSC RCEGCRNTFG RKDGFDDAEH 660 AKELTVSGEK QQSNLQEDQN DHQSPGGTLP ITPSSEIFRP FVKPSLHSNG KPPRSSTLSI 720 GYSTLQPLRK CEFPLQKTAN HFNPPAEGDT PEILRDDASC NNGVKTISPN GKRVSPPHKA 780 LGLSSKSKGG RKLILKSIPS FPSLNGDETS EH*

Sequence ? help Back to Top

Protein Sequence Length: 813 aa Download sequence

MRENPTVNPT LIAASNLING EKRKAVKLPP PGLSFLGGGD RIRLPRAKTQ REDSPTFNFI  60
DDLSPIQPVK SAHGVQVFHS LSFASISSVF TSPQVSSQKE SRFRYPCSGS SKLGSSAENL  120
DQNNLYTGTS DYINLAVARE KCNTICSLNE ANVDPPEQCT TRPNDVPQAA IQYDRDSPKH  180
NTVAGCGVKT EVKLDNGEAL VELAHVAHDG VEKRKVLFAT EIELRDEHQS TQDEEEVAAC  240
DWENLISVDT NDLLVFDSST DSEACKDQEE DFGDDDATLM SSLKPVDSVD PYFRNAVQYP  300
QEGNDEHAIE EHGTDHTPQI LSGTFQNQVL LSDEDHETEK ETGNCISADC KVESQQQRGM  360
RRRCLTFELA GGSKKNSTIN SNLHPSVLLP SSRKCTADNK NLISLKPGSS SLSRALPSIG  420
LHLNTLRTIP TDRMVTKGTP ALGKRFISMS CSINPYPPVT VEQSAVEKSL DVVMDKHPTG  480
KEVLNHDVSH DDASKAPEFD DSNNLTQRSP KKRKCKSESD GDGDACKRCN CKKSKCLKLY  540
CECFAAGIYC VEPCACIGCL NKPIHEETVL ATRKQIESRN PLAFAPKVIR ASKPVQDMGE  600
ETNKTPASAR HKRGCNCKKS NCLKKYCECF QGGVGCSPSC RCEGCRNTFG RKDGFDDAEH  660
AKELTVSGEK QQSNLQEDQN DHQSPGGTLP ITPSSEIFRP FVKPSLHSNG KPPRSSTLSI  720
GYSTLQPLRK CEFPLQKTAN HFNPPAEGDT PEILRDDASC NNGVKTISPN GKRVSPPHKA  780
LGLSSKSKGG RKLILKSIPS FPSLNGDETS EH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-119	CPP family protein