PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.3195

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bHLH

Protein Properties

Length: 268aa MW: 29907.5 Da PI: 8.3385

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.3195	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.6	1.4e-10	122	149	4	31
HHHHHHHHHHHHHHHHHHHHHCTSCCC. CS HLH 4 ahnerErrRRdriNsafeeLrellPkas 31 hn ErrRRdriN+++ L+el+P++ evm.model.AsparagusV1_07.3195 122 VHNLSERRRRDRINEKMRALQELIPHCN 149 6*************************74 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MPPPKPQIND IQLASSLRNG EHVNFSHLLR HNLSNASKCV LGIGEKEGAP AISPQGVQEN 60 TYDAIATSSS GQPSTSNQNL RRKRKNGDEF ECHSEEAEYE STEGNELNQL PASTRKSRAA 120 EVHNLSERRR RDRINEKMRA LQELIPHCNK VMWMGNGMAT MMFPSVQQYM DRASILPMNK 180 PIQLSRTPPL NQMNPINFPA QNMESYDQYY GFPQTQLSPQ AMNLCSYGSH MLQQNQTVKV 240 SGSNSLPTSG IHFENGHSGL KHGNSTW*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	132	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	2e-22	bHLH family protein