PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.3140

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bHLH

Protein Properties

Length: 291aa MW: 31886.4 Da PI: 8.0673

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.3140	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.2	4.5e-11	131	175	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h ++Er+RR+++ ++f L ++P + kK +Ka+iL Av+Y+ +L evm.model.AsparagusV1_07.3140 131 HIIAERKRREKLSQRFIALAAVIPGL-----KKADKASILGDAVKYVTEL 175 999*********************.....9************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MDPSSFANQW NQLSYLNQQQ ILPANISGDH DFQLLNPTES AENISINPCI MKPMLTSFST 60 CSPIEASPKI TYSQERPKKI PKMISWSSCV EQLPINLVPK EEISIGFHSI QDQGLKSSSS 120 QGLRPAHAHE HIIAERKRRE KLSQRFIALA AVIPGLKKAD KASILGDAVK YVTELEQTLK 180 SLQDQKTKKI VESVAINKDH TLSTNNNDSS TGGSSLVICS RSDEKPNQNP SGDLSPEIQI 240 RFLTYNLPLV FPPIGPSCDS RTSLAVLRLI VTVASFSSLP ACPHLLQCLS *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	135	140	ERKRRE
2	136	141	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	1e-22	bHLH family protein