PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3081
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family G2-like
Protein Properties Length: 315aa    MW: 34499.7 Da    PI: 6.6557
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3081genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.26.7e-3293146255
                        G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                    pr+rWt++LH++Fv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  evm.model.AsparagusV1_07.3081  93 PRMRWTTTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 146
                                    9****************************************************7 PP
2Myb_DNA-binding47.54.3e-1594145148
                                    TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
                Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                                    r+rWTt ++  +v+av++lGg+   t+k++ + m+ k +tl ++ks++q+y+
  evm.model.AsparagusV1_07.3081  94 RMRWTTTLHAHFVHAVELLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 145
                                    89************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MATTSADIYP DLSLQISPPS VSLSSTDSGS SGSDTGHVPV PGEPMLSLCL DSMEQVNHHH  60
HQQQQQNNHL HHPQIYGLKR SSRSSMKRSV RAPRMRWTTT LHAHFVHAVE LLGGHERATP  120
KSVLELMNVK DLTLAHVKSH LQMYRTVKST DKTAAAAAGQ GLKDAVGLNQ IQRIGSDQVE  180
EIVQTTEQAA GVNVDHPYSL SIPTPLTPPL PRSPSWPYSS MEDNDWNSLM IQKTSSPSNI  240
RCEAYLVKGK RADEGALHSS PRESEEGTGL SLSPSSHFES SMLADLPNLE FTLGRQSWQM  300
ECQESSELTL LKCL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.11e-40G2-like family protein