PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.3040 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | TCP | ||||||||
Protein Properties | Length: 283aa MW: 31719.8 Da PI: 9.8765 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 98.5 | 1.2e-30 | 44 | 157 | 2 | 109 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec......ea 75 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WL+++a+++i++l+ ++ +++ + + evm.model.AsparagusV1_07.3040 44 FGGKDRHSKVSTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLINAAQHEIDKLPPLQIPPEGFIqlppqvNR 123 689*************************************************************9999844444543355 PP TCP 76 esssssasnsssgkaaksaakskksqksaasaln 109 es + s s+s+++++ k+ +k+++++ + + n evm.model.AsparagusV1_07.3040 124 ESLVRSFSQSTQRDEPKEILREKENTTKGNDMAN 157 5555555544444444444455555555555554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MINNRRDRDL QAKEEGDQKI PPTSSSRLWS GLKNPRIVRV SRAFGGKDRH SKVSTIRGLR 60 DRRVRLSVPT AIQLYDLQDR LGLNQPSKVV DWLINAAQHE IDKLPPLQIP PEGFIQLPPQ 120 VNRESLVRSF SQSTQRDEPK EILREKENTT KGNDMANAQV LPSHFSLLGS LSNTMPYTSY 180 YNLEAANAYL SQIGVRSSHS NEAQAMSIPS SRNLPLESQI VFCPPGIMPS MFQSNVTNPM 240 EFNAKQFGQL QMVNSVSQTP QSNLEINSLH LSSPQERPSS EF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02150.1 | 6e-47 | TCP family protein |