PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.3002

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 418aa MW: 46015.6 Da PI: 8.234

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.3002	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.4	3.1e-33	133	191	1	60
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +dDgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers +++v+ei+Y+g+Hnh+k evm.model.AsparagusV1_07.3002 133 VDDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSV-EGQVTEIIYKGQHNHQK 191 59**************************************.*************85 PP
2	WRKY	105.7	2.4e-33	302	360	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k+v++tYeg+Hnh+ evm.model.AsparagusV1_07.3002 302 LDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDSKAVITTYEGKHNHD 360 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MGAMSLVVSQ TQSQSPFFIP AGLSPGGLLE SPAMFSPNLG SFGISHQQAL AQVTAQASQS 60 HSHMYGQAEF PSSHHTTTTT TVTQPTGGAL NMASYQHIQP ATSDANNMSF ESGRISHCTQ 120 RTQPPAVVVD KPVDDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCPVKKKV ERSVEGQVTE 180 IIYKGQHNHQ KPPPNKRAKE SSSNANGSNE ISTNQDYPDN ADTISQSKRD RESCNETCEQ 240 LSGSSDGEEV GNVEVGQDEV GNSEPDPKRR VIDGRATEST SSHRTVTEPR IIVQTTSEVD 300 LLDDGYRWRK YGQKVVKGNP HPRSYYKCTS AGCNVRKHVE RASTDSKAVI TTYEGKHNHD 360 VPAARNSSHN TACSSNFQPK PHNPIPNHQA FPRREDLRNT VHRPVAVLQL KEEHNMP*

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MGAMSLVVSQ TQSQSPFFIP AGLSPGGLLE SPAMFSPNLG SFGISHQQAL AQVTAQASQS  60
HSHMYGQAEF PSSHHTTTTT TVTQPTGGAL NMASYQHIQP ATSDANNMSF ESGRISHCTQ  120
RTQPPAVVVD KPVDDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCPVKKKV ERSVEGQVTE  180
IIYKGQHNHQ KPPPNKRAKE SSSNANGSNE ISTNQDYPDN ADTISQSKRD RESCNETCEQ  240
LSGSSDGEEV GNVEVGQDEV GNSEPDPKRR VIDGRATEST SSHRTVTEPR IIVQTTSEVD  300
LLDDGYRWRK YGQKVVKGNP HPRSYYKCTS AGCNVRKHVE RASTDSKAVI TTYEGKHNHD  360
VPAARNSSHN TACSSNFQPK PHNPIPNHQA FPRREDLRNT VHRPVAVLQL KEEHNMP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-128	WRKY family protein