PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.2942
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family LBD
Protein Properties Length: 150aa    MW: 17125.5 Da    PI: 12.3535
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.2942genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26023.21.9e-0726921781
                         DUF260 17 vlapyfpaeqpkkfanvhklFGasnvlkllkalpeee..redamsslvyeAearardPvyGavgvil 81
                                   vla +fpa   +  +  +++F++++  + l++ p+      +  +s  yeAeara dPvy ++++ +
  evm.model.AsparagusV1_07.2942 26 VLALCFPAPADEIRQRCNRVFRREQRWRSLNESPRAGgeNANRRQSSQYEAEARAPDPVYAVARTSR 92
                                   799*****************************99887335566789**************9988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MSYVLARRCG RRQVLAAQRA RRAAYVLALC FPAPADEIRQ RCNRVFRREQ RWRSLNESPR  60
AGGENANRRQ SSQYEAEARA PDPVYAVART SRFLPGTRST RSRTTFKSSK RSVAPSICPR  120
RLRPLPPSHH PTFRPPPRSA FNANWTFTT*