PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.2749 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 213aa MW: 24109.5 Da PI: 4.5774 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 40 | 6.6e-13 | 51 | 91 | 12 | 57 |
E2F_TDP 12 kflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealn 57 +f+ l+e++e + v+l+++a++L v +rRRiYDi+NVLe+++ evm.model.AsparagusV1_07.2749 51 NFVGLYESKEVESVCLDDAARRL---GV--ERRRIYDIVNVLESVG 91 899**999999************...**..*************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MSSLSSFDQD DESFEHTLLV VREVSFFKIP PRSSSGGYKC GEWLRVLWVF NFVGLYESKE 60 VESVCLDDAA RRLGVERRRI YDIVNVLESV GSKVVLWDLM PICVEFSTRC MEGGFDSEEP 120 DYEETHSIVI LPDYISLPFS SVELPENLWL NLTDGMIFCT NVKIFYGIGR DRDLRVLELP 180 RACKRAGWSS VLVVRSDARQ RGCSLISNSV AV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.1 | 4e-13 | E2F/DP family protein |