PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.268 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 251aa MW: 28155.8 Da PI: 7.6423 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.3 | 3.7e-05 | 189 | 220 | 18 | 54 |
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++ L++l+ + +K + a++L++A+e+Ik+L evm.model.AsparagusV1_07.268 189 HKITALQQLVSPY-----GKTDTASVLKEACEHIKDL 220 6788899999888.....9****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MLRFFEPEAE PRWSISTAPS DHYKCSRMRE DSILPLRSQA FLTATIGTSG QSRGESSRAS 60 AEFESNSSYN GDFLNISSQD CKSFQFESIA PLPALDQNPG QTSLTMNPME LRVSGFTSHH 120 DHALPESKKQ RNQLIAAHQI MDQRLMMGRE SKRCKAEQDD NNPQKLSMMA PTMKAPMVTN 180 VKKSQKLGHK ITALQQLVSP YGKTDTASVL KEACEHIKDL HQKIRMLSSP YFGGQTSIFF 240 QVDDDDHELR * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20640.1 | 2e-17 | bHLH family protein |