PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.2575

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bHLH

Protein Properties

Length: 293aa MW: 31733.6 Da PI: 6.0404

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.2575	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.6	1.2e-09	140	184	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P+ K + a +L + v+Y+k L evm.model.AsparagusV1_07.2575 140 HSIAERLRRERIAERIRALQELVPTT-----NKTDRALMLDEIVDYVKFL 184 99*********************7.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MANPPPDGIH DDFFEQIFSM PASYATARDG GALGYGDSSA SSGFSLGLSL DNHQNQQQGQ 60 LEDGGKRILN DDDQHSDGRE PPVQLASLFP PFGHSPVSQG RPNPPPFQVL ATHGTVNAAP 120 HHPAPRPRVR ARRGQATDPH SIAERLRRER IAERIRALQE LVPTTNKTDR ALMLDEIVDY 180 VKFLRLQVKV LSMSRLGGAG AVAQLVADIP MSSVQVGEAS EAKTTPQVWE KWSTDGTERQ 240 VAELMEEDIG AAMRFLQSQA LCIMPISLAA AIYHTQPRPE ASSVKPEPSN PS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	145	150	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02590.3	5e-57	bHLH family protein