PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.2519
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family YABBY
Protein Properties Length: 78aa    MW: 8842.25 Da    PI: 8.7969
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.2519genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY51.34.8e-16432134162
                          YABBY 134 keeiqrikasnPdishreafsaaaknWah 162
                                    +eeiqrika+nP++ hreafs+aaknWa 
  evm.model.AsparagusV1_07.2519   4 REEIQRIKAANPEMPHREAFSTAAKNWAK 32 
                                    7**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
MLHREEIQRI KAANPEMPHR EAFSTAAKNW AKCEPRGLIC STAEKDVTPK AIALEHEKTN  60
GLLMKSFDVF KQIEHRI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.11e-13YABBY family protein