PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.2505

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

TALE

Protein Properties

Length: 445aa MW: 49910.8 Da PI: 6.8338

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.2505	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.3	1.5e-09	374	406	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +e+ LAk +gLt++qV++WF N R + evm.model.AsparagusV1_07.2505 374 HPYPNDTEKLMLAKDTGLTKSQVSNWFINARVR 406 89*****************************88 PP
2	BELL	112.8	1.9e-36	232	303	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erq+lq+k +kLl +l+eVd+rYkqy++q+q+++ssF+++ag +akpYt+lAl++iSrhF cL+dai +qi evm.model.AsparagusV1_07.2505 232 ERQDLQNKVTKLLAILDEVDRRYKQYYHQMQIIVSSFNVMAGSCAAKPYTALALQTISRHFCCLRDAINDQI 303 799*******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MATFYPTNQR DLMTIPESSV GGNMMCFNFV SSGPFSEMLA GSNESQTNCN SFPVILQEYS 60 WRHNSNEMSV MQANNGSMEG EDDLIQRSVI FNGQALSNFS KMQRQELSLS LGSQIPISNS 120 DISMLNSHQS SENGDSCRDD TRNKHFHANS STYALTNLAS NISNSKYLKA AQKLLDEVVN 180 VHNGLIQKES KKQSYNASAV CKDTDGLLKS DGIPANPQES TVNSSSDLSS SERQDLQNKV 240 TKLLAILDEV DRRYKQYYHQ MQIIVSSFNV MAGSCAAKPY TALALQTISR HFCCLRDAIN 300 DQIHSTRKTI GDQESPSTKG CGISRLRHID QHLRQERATQ KFGMMQPHAW RPKRGLPETS 360 VSALRAWIFE HFLHPYPNDT EKLMLAKDTG LTKSQVSNWF INARVRLWKP MIEEMYKEEF 420 GETEVDSNSS SENPPKGRDD AFVI*

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MATFYPTNQR DLMTIPESSV GGNMMCFNFV SSGPFSEMLA GSNESQTNCN SFPVILQEYS  60
WRHNSNEMSV MQANNGSMEG EDDLIQRSVI FNGQALSNFS KMQRQELSLS LGSQIPISNS  120
DISMLNSHQS SENGDSCRDD TRNKHFHANS STYALTNLAS NISNSKYLKA AQKLLDEVVN  180
VHNGLIQKES KKQSYNASAV CKDTDGLLKS DGIPANPQES TVNSSSDLSS SERQDLQNKV  240
TKLLAILDEV DRRYKQYYHQ MQIIVSSFNV MAGSCAAKPY TALALQTISR HFCCLRDAIN  300
DQIHSTRKTI GDQESPSTKG CGISRLRHID QHLRQERATQ KFGMMQPHAW RPKRGLPETS  360
VSALRAWIFE HFLHPYPNDT EKLMLAKDTG LTKSQVSNWF INARVRLWKP MIEEMYKEEF  420
GETEVDSNSS SENPPKGRDD AFVI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-116	TALE family protein