PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.2339
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 327aa    MW: 36193.3 Da    PI: 5.7155
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.2339genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.71.3e-13174220147
                                    TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
                Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                    ++ W++eE+ l++ + k +G g Wk+Ia+ +  +Rt+ q+ s+ qky
  evm.model.AsparagusV1_07.2339 174 KNVWSEEEHRLFLMGLKVHGRGAWKSIAKNFVHTRTPSQVASHAQKY 220
                                    678*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MNPTEVTRAA KTEDLSATGL HYSQDFLGMG STCSGIESTS ATEKKPEEED LGLSTEKGAK  60
GAVFSEEIAR QGSFDPIYER PPTEESPNEQ MLKQATEAGE ELQIWLEKIT NGDEVLSLQT  120
WGMETVEVMP QGAECVVPEE VTRARGGKNV LEDVRTVTAG KRTEGPGTFT TRKKNVWSEE  180
EHRLFLMGLK VHGRGAWKSI AKNFVHTRTP SQVASHAQKY FNRQLDERQK RRPSILDIKT  240
INTTAKTRRE SMYDSIKSSS QVNLNNAKRS SPSSMPLPPL PQMEFTQMAS NEHPNPNTPK  300
TNSQLPQPDS LEQQQYALTS GGGDHD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.12e-26MYB_related family protein