PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.2256
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family TCP
Protein Properties Length: 329aa    MW: 34750.3 Da    PI: 11.2588
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.2256genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP371.2e-111261612661
                            TCP  26 aecaarfFdLqdeLGfdkdsktieWLlqqakpaike 61 
                                    + caar+F  + + G+++d++tieWLl qa+p    
  evm.model.AsparagusV1_07.2256 126 IICAARVFSPDTRAGHKSDGQTIEWLLAQAEPPSSP 161
                                    78*****************************97654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MRKRNQESRA METKGEGGRR EGEIGPPELL RPSGNGDDDK SKEAKMRTRA KSQCFFPEKL  60
LFGFFLLGSG KKKNRWICPC VIYKIRSFEL ATVPSTARAT VRVKKPSRRT ATRRSTAAAA  120
HPHAAIICAA RVFSPDTRAG HKSDGQTIEW LLAQAEPPSS PPPAGASDPP ASPPRPTPPP  180
APGPTSPPGP RQPHPPSSLG SGSGTTADDS KDESSVGPTP VGIGAAGFWR AGQARLRPAV  240
ELLGQEIVMP RRSSAGGGVH RRGRSGRPGL GTYLADEPGA FESARFSVGG RGGERREEGR  300
GESLIGVLGL GLGFLSRVRV LGDGFRDF*