PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.1741 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | HSF | ||||||||
Protein Properties | Length: 254aa MW: 29709.4 Da PI: 6.7415 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 113.9 | 1.1e-35 | 25 | 117 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEE CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweF 81 Fl k+y++++d+ +++++sw e+ ++fvv+ + ef++++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF evm.model.AsparagusV1_07.1741 25 FLIKTYQLVDDPCTDHIVSWGEDDSTFVVWRPPEFSRDILPNYFKHNNFSSFVRQLNTYGFRKIVADR---------WEF 95 9****************************************************************999.........*** PP EESXXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 82 khksFkkgkkellekikrkkse 103 +++ F+kg+k+ll++i+r+k++ evm.model.AsparagusV1_07.1741 96 ANDFFRKGEKHLLSEIHRRKTS 117 *******************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MSFLVESCRE MLLPMESNKS VPAPFLIKTY QLVDDPCTDH IVSWGEDDST FVVWRPPEFS 60 RDILPNYFKH NNFSSFVRQL NTYGFRKIVA DRWEFANDFF RKGEKHLLSE IHRRKTSQIP 120 QQYFYQQQPP TLYNAHQDEI STNWIDSPLP SPNSTDSTSE FISALSEDNQ RLRRRNSLLL 180 SELTHMKKLY NDIIYFLQNH VSPVQLDNQR VANFSNGTSL KLMEESHDQN AVKLFGVPLH 240 GKKRLHHECE SLE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G46264.1 | 2e-78 | HSF family protein |