PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.1636 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 246aa MW: 28691.9 Da PI: 8.1059 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.3 | 1.4e-13 | 75 | 127 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +hne Er RR+++N+ ++ LrellP+ + + kKls + ++ eYI +Lq evm.model.AsparagusV1_07.1636 75 KKSTHNEYERDRRKKLNKLYSSLRELLPEkD---QRKKLSIPCTIAHVLEYIPKLQ 127 689**************************77...9999***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MLPLSPTTFP TFDWQLDQEH MIHEIPLQDL FASYNLNEGD ISHNSSISSP HLPDFEYEDI 60 EDSIIKTSKL SNSMKKSTHN EYERDRRKKL NKLYSSLREL LPEKDQRKKL SIPCTIAHVL 120 EYIPKLQKHI KRLQRKKEEL LSRVPSNDYS SICNKERMIN PVISAVFLSK KEIMIQICIL 180 NKQSAATPFS KVVNILEREG FRLLNATTLT THDDKTIYSL HLQAKEAMRM ENQNFFEQLV 240 NFLNE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 6e-32 | bHLH family protein |