PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | evm.model.AsparagusV1_07.1634 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 183aa MW: 21243.9 Da PI: 6.1411 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 21.6 | 3.8e-07 | 82 | 105 | 8 | 30 |
HHHHHHHHHHHHHHHHHCTSCC.C CS HLH 8 rErrRRdriNsafeeLrellPk.a 30 Er RR+++N+ ++ LrellP+ + evm.model.AsparagusV1_07.1634 82 YERERREKLNKLYSSLRELLPEkD 105 59*******************944 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 183 aa Download sequence |
MLPLSPSNIV PDFEWQFEEQ MMHEFPCDDL FARYNFQETD TSHNASNSSP QPQDFEYDGT 60 QNSGDGNKKL QISMKKSCQH DYERERREKL NKLYSSLREL LPEKDKRIQM TEMMNSSSRI 120 FSGECHCSVK KRDSSXXXXX XRAGEQTTSG RAGNERTSSR ANTKIRESTK TIQRRVDEDD 180 ER* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G41240.2 | 9e-08 | bHLH family protein |