PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.1360
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ARR-B
Protein Properties Length: 670aa    MW: 74188.5 Da    PI: 6.4663
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.1360genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like857.5e-27201254155
                        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                    k+r++W+ +LH++Fv av+qL G ekA+Pk+ilelm+ + Lt+e+v+SHLQkYRl
  evm.model.AsparagusV1_07.1360 201 KQRVVWSVDLHQQFVAAVNQL-GLEKAVPKKILELMNNPALTRENVASHLQKYRL 254
                                    79*******************.********************************8 PP
2Myb_DNA-binding36.98.7e-12203253148
                                    TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
                Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                                    r  W+ ++++++v av+qlG +   +k+I + m+   +t++++ s++qky+
  evm.model.AsparagusV1_07.1360 203 RVVWSVDLHQQFVAAVNQLGLEkaVPKKILELMNnPALTRENVASHLQKYR 253
                                    678********************************99*************7 PP
3Response_reg79.11.5e-26211291109
                                    EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEE CS
                   Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvt 78 
                                    vl+vdD+ + +++++ +l++ +y  v++++ + eal++l+e++  +D++l D+ mp+mdG++ll++i  e  +lp+i+++
  evm.model.AsparagusV1_07.1360  21 VLVVDDDATCLRIVEHMLKRCDY-CVTTCSRAVEALRILRENKrgFDIVLSDVYMPDMDGFKLLEHIGLEM-DLPVIMMS 98 
                                    89*********************.***************999999**********************6654.8******* PP

                                    STTTHHHHHHHHHTTESEEEESS--HHHHHH CS
                   Response_reg  79 ahgeeedalealkaGakdflsKpfdpeelvk 109
                                    a + ++ +l+ +  Ga d+l Kp+++e+l +
  evm.model.AsparagusV1_07.1360  99 ADDGKDVVLKGVTHGAVDYLLKPVSMEALKN 129
                                    ***************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 670 aa     Download sequence    
MSSQPSAGGG PHARFPAGLR VLVVDDDATC LRIVEHMLKR CDYCVTTCSR AVEALRILRE  60
NKRGFDIVLS DVYMPDMDGF KLLEHIGLEM DLPVIMMSAD DGKDVVLKGV THGAVDYLLK  120
PVSMEALKNI WQHVIRKRRN ESKELENSGS LDDSDKQKKY SDNGDSGSLG IEENWKVVKR  180
KKEGEEEDEF EEREDASSLK KQRVVWSVDL HQQFVAAVNQ LGLEKAVPKK ILELMNNPAL  240
TRENVASHLQ KYRLYLKRVS GPQHQGRADS AFSSASDSSF SSVPSLDVVD LQALAASGQL  300
TPLAIMALNS GPRSFFNSNA PFVNSSKMQP AMMHRVNNNQ MGLLYGPSAS MDSRQMVQAQ  360
QIYRAYQNTG HQVSEGAQGL LKLPSPERTS SSFSSGLISA GSSNSFVAQM NPQRQQISLP  420
QHQEQMQIGV QQPSRGQFLN RVVVEHDSKI SSTLGQQMVS NGVSNNFLVR SGAIINGRPP  480
LQVNYMNMPP YAVPRALYSN VQNPHVSGTV NSSVIANTFT GMKQEAITIA QRGVEQIDSI  540
NSLKEVKDIV PNYDMFSDFN QSKNQEWKLQ NLNLSYESSK QVGTQLSSID YGFSISAQRD  600
GNGIMKEGVP RNTCAMTKEV YSMTQTAIEH EKVEFVPQES LFAAADDNYD LESIFGRQPD  660
TNGHVEFNF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-114ARR-B family protein