PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_07.1336 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | ERF | ||||||||
Protein Properties | Length: 77aa MW: 8866.09 Da PI: 9.833 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.5 | 5.3e-16 | 11 | 60 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkle 54 +y GVr ++++ ++vAeIrd + + +r++lg++ aeeAaka+ + k++ evm.model.AsparagusV1_07.1336 11 KYIGVR-HRTWSKFVAEIRDT---NrHGARVWLGTYNMAEEAAKAYNMVAYKMR 60 89***9.777**********4...3234*********************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 77 aa Download sequence |
METNNDGGEA KYIGVRHRTW SKFVAEIRDT NRHGARVWLG TYNMAEEAAK AYNMVAYKMR 60 AYVSKDGRYV IELKYL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 2e-20 | ERF family protein |