PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.1329
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 147aa    MW: 16679.1 Da    PI: 10.2246
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.1329genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.31.5e-171461148
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
                Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                                   +grWT+eEde+l+++++  G g+W++ ++  g+ R++k+c++rw +yl
  evm.model.AsparagusV1_07.1329 14 KGRWTAEEDEKLLNYITANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61
                                   79******************************99************97 PP
2Myb_DNA-binding55.51.3e-1767112148
                                    TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
                Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                                    rg+ T+eE++++++ ++ lG++ W+ Ia +++ gRt++++k++w+++l
  evm.model.AsparagusV1_07.1329  67 RGNITQEEEQIIIKFHATLGNR-WSQIAGHLP-GRTDNEIKNYWNSHL 112
                                    7999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MGRAPCCEKV GLKKGRWTAE EDEKLLNYIT ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRGDLKRGNI TQEEEQIIIK FHATLGNRWS QIAGHLPGRT DNEIKNYWNS HLSRRVHSFR  120
KIGSENEIVT MVLDKVPGGG RXXXXD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.16e-74MYB family protein