PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.13
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 288aa    MW: 32003.4 Da    PI: 6.8635
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.13genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.44.3e-103077247
                                 SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
              Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                                 g+WT++E +++ +a + + ++   +W+++a+ ++ g+t  +++ +++++
  evm.model.AsparagusV1_07.13 30 GSWTQQENKIFENALAHFDSRtpdRWEKVAALIP-GKTVRDVIAHYHDL 77
                                 89********************************.***********975 PP
2Myb_DNA-binding36.41.2e-11139183347
                                  SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
              Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                  +WT++E+ l++ +  ++G g+W++I+r +  +R + q+ s+ qky
  evm.model.AsparagusV1_07.13 139 PWTEDEHRLFLLGLIKHGRGDWRSISRNFVITRNPTQVASHAQKY 183
                                  7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MVTKSWMEVL SPTSSYSPNS TWVLGEKKSG SWTQQENKIF ENALAHFDSR TPDRWEKVAA  60
LIPGKTVRDV IAHYHDLEDD VNYIEAGLIP LPGYSTCLDL GAGCFDDDDD DDGDGINQSY  120
FVGGKRGRFS DHERKKGAPW TEDEHRLFLL GLIKHGRGDW RSISRNFVIT RNPTQVASHA  180
QKYFNRRNSS NKDKRRASIH DITVADMTDN SPSSPSQSST LSMKSAVTAV PVSPGSDQTK  240
EAAARVYSRS MLPDSSTNPF GIQSESQNSY RGALHDPMAR HQTSMLF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.12e-73MYB family protein