PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.1299
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 265aa    MW: 29178 Da    PI: 9.8069
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.1299genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.81.1e-33141198259
                                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                    +Dgy+WrKYGqK vk+s+fprsYYrCt+a C vkk+vers++dp++v++tYeg+H+h+
  evm.model.AsparagusV1_07.1299 141 EDGYRWRKYGQKAVKNSPFPRSYYRCTTAMCGVKKRVERSSKDPTIVVTTYEGQHTHH 198
                                    8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MKTETRSEEF ELSGFFSRSP LDRAGNGSSS LGFMDLLGVQ DLTSHSLFDD MPPPPMPVIL  60
PPESSMVVNL PVTPNESSVS SSSTEAPNEQ DLANGSAASD VDTELDKEKK EPSKGWEKKG  120
QKRKREPRFA FLTKSGVDHL EDGYRWRKYG QKAVKNSPFP RSYYRCTTAM CGVKKRVERS  180
SKDPTIVVTT YEGQHTHHSP VVPRGSNMMH RAPPTAVHSS SPTCRLRRLI LVSRSISAKC  240
HQSGIGTLIR RPAVPSEATG CFRT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.19e-48WRKY family protein