PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.115

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

TALE

Protein Properties

Length: 320aa MW: 35808 Da PI: 7.3901

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.115	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	33.4	7.7e-11	116	153	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++++ LAk++gLt +qV++WF N R + evm.model.AsparagusV1_07.115 116 FEHflHPYPTDTDKQMLAKQTGLTRNQVSNWFINARVR 153 564459******************************88 PP
2	BELL	83.1	3.5e-27	1	58	15	72
BELL 15 lleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +l+eV++rYk y++q+q+vi+sFe v gl sa+pY+s+Alk +S+hFrcLk+ai++++ evm.model.AsparagusV1_07.115 1 MLDEVYRRYKLYHQQVQAVIASFESVPGLSSAAPYASMALKVMSKHFRCLKNAISDHL 58 9*****************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MLDEVYRRYK LYHQQVQAVI ASFESVPGLS SAAPYASMAL KVMSKHFRCL KNAISDHLHH 60 INKAIGKEGF SEEENSGFGL INRQTNNYGT IRQPHVWRPQ RGLPERAVAV LRAWLFEHFL 120 HPYPTDTDKQ MLAKQTGLTR NQVSNWFINA RVRLWKPMVE EIHSLEMRQQ NKAGASDANH 180 NTDKQPQLPS SSTATSSNDT SFFHNQNQSS KRPHDELSQV SHHIQEPNYN FVFDGFHGHH 240 NIEVGGGVGV KENGDVSLTL GLHQNNGICL ADPIPLNVVH GFGLGLEECN DPYVIGSFGG 300 QDRQFGKDIG GRLLHDFVG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	4e-65	TALE family protein